Youtor
Viral Genome Assembly and Annotation
>> YOUR LINK HERE: ___ http://youtube.com/watch?v=fCIIF0dop0c
Viral Genome Assembly, Annotation and Visualization • Download the Ebook for this tutorial: / 82549645 • Support my work • https://www.buymeacoffee.com/informat... • https://www.paypal.com/paypalme/thein... • / bigdataanalytics • One-on-One coaching (Video Conferencing) • https://calendly.com/bioinformaticscoach • One-on-One coaching(Audio Call) • https://clarity.fm/vincentappiah • Get more bioinformatics tutorials on Patreon • / bigdataanalytics • Subscribe to my channels • Bioinformatics: / @bioinformaticscoach • Data Science: / @datasciencecoach • Short Clips: / @bioinformaticscforbeginners • Reach out • [email protected] • Materials • ___________________________________________________________________________________________ • Download the Ebook for this tutorial: / 82549645 • Original tutorial:https://compeau.cbd.cmu.edu/online-ed... • How to Install Mamba: • Install , Configure and Run Mamba ... • Tools used in this tutorial • spades:https://github.com/ablab/spades • sratools:https://github.com/ncbi/sra-tools • prokka:https://github.com/tseemann/prokka • bandage:https://rrwick.github.io/Bandage/ • jbrowse:https://jbrowse.org/jb2/ • • • Genome Visualization Tutorials: • Genome Visualization Tutorials • Genome Assembly Tutorials : • Genome Assembly Tutorials • Genome Annotation Tutorials: • Genome Annotation Tutorials • SRAToolkit Tutorials • How to download fastq files: • How to DOWNLOAD any Sequence data usi... • How to download fasta files: • How to DOWNLOAD Sequence data using S... • • Chapters • 01:18 Install tools • 03:52 Create a working directory and cd into it • 04:03 Download the example data • 06:24 Download data using sra toolkit • 07:16 Put the files into another directory • 07:50 Genome assembly with spades • 12:50 Spades output extract • 15:25 Genome assembly visualization with bandage extract • 21:52 Genome annotation with prokka • 36:26 Visualize genome annotation using jbrowse • bioinformatics for beginners • bioinformatics tutorial • bioinformatics course • Bioinformatics Project • #bioinformaticsforbeginners #bioinformatics #bioinformática #linuxforbeginners #linux #genomics #ncbi
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