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Editing phylogenetics trees in FigTree
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Video Source: www.youtube.com/watch?v=E1la9W7ljRs
In this video I show you how you can edit and modify your phylogenetic tree using the program FigTree to make it nicer visually, easier to read, and more intuitive to understand. I use the same tree file as in my Interpreting phylogenetics trees video. • Interpreting phylogenetics trees : • • Interpreting phylogenetic trees • I post the link to the paper below, as well as a great article on colugos in WIRED. In case you would like to make the same tree I posted all files I used in my GitHub repository for you to download. • WIRED article on colugos: • https://www.wired.com/2014/11/absurd-... • Janecka et al. 2008 paper on cryptic diversity in colugos: • https://www.cell.com/current-biology/... • Files in GitHub repository: • https://github.com/janeckaj/sequence-... • ColugoMtDNA_information_on_alignment.docx (description of the sequence file) • ColugoMtDNAnoHSAv2.fas (sequence alignment) • ColugoMtDNAnoHSAv2.mtsx (MEGA tree session) • ColugoMtDNAnoHSAv2_ML_BS.nwk (tree in newick format) • ColugoMtDNAnoHSAv2_ML_BS.png (picture of tree)
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