Bioinformatic tools online Differential Gene Expression analysis DESeq2 DESeq EdgeR
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Video Source: www.youtube.com/watch?v=lqn9hD5kXmo
In this video, I show you, how you can do a DGE analysis with Bioinformatic tools online We start from sorted bam-files coming from a random set of 6 fastq-files and do all post-processing steps until we are ready for the DGE. We look for differences in the results, when using DEseq2, DEseq or EdgeR as DGE-tool. We also test the outcome of different program versions of DESeq2. • At the end, I show you that for reproducible data analysis, the choice of the program as well as the program version are of high 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